Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240613140402_ctdu CTCCATTCTCAAGACTCTCTCTCTTTCATTTG(+AGGACA)GTACCCTGTACCCCAGTGCCTCTGCGTCGCC NGG 10 8 17 8 24 0 100 5 10
    240613140359_23dk AAAAATGGAATGAGCCACCGGCAGGTGCCCTG(+AGGACA)GTACCAGAAGGACTGACTGCCGTGAGAGACA NGG 10 8 17 8 24 0 100 5 10
    240613140358_qm4j GATAGTGTCTCTCACGGCAGTCAGTCCTTCTG(+AGGACA)GTACCAGGGCACCTGCCGGTGGCTCATTCCA NGG 10 8 17 8 24 0 100 5 10
    240613140357_cc48 TGCCCTTCTGAGACCAACAGGGACAAGAGCAG(+AGGACA)GATCCCAGTGTGTGGCCCAGCAAGCTGGGGA NGG 10 8 17 8 24 0 100 5 10
    240613140355_s8rj GAGTCTCCCCAGCTTGCTGGGCCACACACTGG(+AGGACA)GATCCTGCTCTTGTCCCTGTTGGTCTCAGAA NGG 10 8 17 8 24 0 100 5 10
    240613140353_7ign ACCCGCCGGGCACCTGGCTTTGTCCCATGCGG(+AGGACA)GATCCTATCATGACACTAGAAGAAGCCCCCG NGG 10 8 17 8 24 0 100 5 10
    240613140352_m89r TGTCTCGGGGGCTTCTTCTAGTGTCATGATAG(+AGGACA)GATCCCGCATGGGACAAAGCCAGGTGCCCGG NGG 10 8 17 8 24 0 100 5 10
    240613140351_znby GCACCGAGTGGGGAGGAGGGAGAGGGATGACG(+AGGACA)GTACCGCACTGTCCACATCTCCCTGGGCCCC NGG 10 8 17 8 24 0 100 5 10
    240613140350_wj1u GACGGGGGGCCCAGGGAGATGTGGACAGTGCG(+AGGACA)GTACCGTCATCCCTCTCCCTCCTCCCCACTC NGG 10 8 17 8 24 0 100 5 10
    240613140348_67ww CCACACTGGATAAGATGTGTGAGCTCCCAGCG(+AGGACA)GATCCTTCTCTCAAGCACCAAGCCCCAGTTT NGG 10 8 17 8 24 0 100 5 10