Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240606152606_96rt GGGGTATGTGGGAGCCGGTACACACGGTGCTG(+AAAAAA)GATCCAGAGCTGGGGTGGGGTGCATGTCCCT NGG 10 8 17 8 24 0 100 5 10
    240606152605_rnze ACCCCAGGGACATGCACCCCACCCCAGCTCTG(+AAAAAA)GATCCAGCACCGTGTGTACCGGCTCCCACAT NGG 10 8 17 8 24 0 100 5 10
    240606152603_yuvc GGGGTATGTGGGAGCCGGTACACACGGTGCTG(+AAAAAA)GATCCAGAGCTGGGGTGGGGTGCATGTCCCT NGG 10 8 17 8 24 0 100 5 10
    240606152602_0pe0 ACCCCAGGGACATGCACCCCACCCCAGCTCTG(+AAAAAA)GATCCAGCACCGTGTGTACCGGCTCCCACAT NGG 10 8 17 8 24 0 100 5 10
    240606152559_iu6g GAACGCCTACTTCCTGTCTCTGCTGTCTCCCG(+AAAAAA)GTACCTGTGCTTCTGAGCCCAGACTATCTCT NGG 10 8 17 8 24 0 100 5 10
    240606152558_un8q TGACAAGAGATAGTCTGGGCTCAGAAGCACAG(+AAAAAA)GTACCGGGAGACAGCAGAGACAGGAAGTAGG NGG 10 8 17 8 24 0 100 5 10
    240606152556_r47c AGCAGGATGCAAATGTGGAGGCAGTCCCAGAG(+AAAAAA)GATCCCAAAACTGCTGCCAAGTTACAGGAGA NGG 10 8 17 8 24 0 100 5 10
    240606152555_kms5 GGGTGTCTCCTGTAACTTGGCAGCAGTTTTGG(+AAAAAA)GATCCTCTGGGACTGCCTCCACATTTGCATC NGG 10 8 17 8 24 0 100 5 10
    240606152553_wk5j GGACAATCCTGACCCTCTTCCGCTGGCCTGTG(+AAAAAA)GATCCCTTGACAAGCGACTCTGTTCTGTCCA NGG 10 8 17 8 24 0 100 5 10
    240606152551_vhds GACCCTGGACAGAACAGAGTCGCTTGTCAAGG(+AAAAAA)GATCCACAGGCCAGCGGAAGAGGGTCAGGAT NGG 10 8 17 8 24 0 100 5 10