Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240613115843_tb0q CCAAGAACCAACTAGCTGCCTCAGGTCTCGTG(+AGGACA)GATCCCAGATGGACATGGCAGTAACTCAGAG NGG 10 8 17 8 24 0 100 5 10
    240613115842_sbt6 ACCGGCTCTGAGTTACTGCCATGTCCATCTGG(+AGGACA)GATCCACGAGACCTGAGGCAGCTAGTTGGTT NGG 10 8 17 8 24 0 100 5 10
    240613115840_v4o0 TCTCACCTGAGAAATGGTGCAAACCAACCAGG(+AGGACA)GATCCTTAGGCTACTGAGAAGGCTGTCTGCT NGG 10 8 17 8 24 0 100 5 10
    240613115838_6qoh AGGTAAGCAGACAGCCTTCTCAGTAGCCTAAG(+AGGACA)GATCCCTGGTTGGTTTGCACCATTTCTCAGG NGG 10 8 17 8 24 0 100 5 10
    240613115836_fw6v GGGCCCTGTGACCTTCAACATCTGGCAGGGGG(+AGGACA)GATCCTGGGACAGGGGGTGGAGAAGGCAGTT NGG 10 8 17 8 24 0 100 5 10
    240613115833_k3iz GTGTCAACTGCCTTCTCCACCCCCTGTCCCAG(+AGGACA)GATCCCCCCTGCCAGATGTTGAAGGTCACAG NGG 10 8 17 8 24 0 100 5 10
    240613115832_t4ag TCACTAAGAGGACTGAAGGATCTAGTTGAGAG(+AGGACA)GATCCCTCATGAACGTCCACTACCAGCCAGA NGG 10 8 17 8 24 0 100 5 10
    240613115830_iek0 TGAGCTCTGGCTGGTAGTGGACGTTCATGAGG(+AGGACA)GATCCTCTCAACTAGATCCTTCAGTCCTCTT NGG 10 8 17 8 24 0 100 5 10
    240613115829_oskj TGGATAGGGTTGGAGCTACTGGGACAGAGCTG(+AGGACA)GATCCAGCCATGAGTCTTATGTCCTCCCAGA NGG 10 8 17 8 24 0 100 5 10
    240613115828_vwmx TCTGCTCTGGGAGGACATAAGACTCATGGCTG(+AGGACA)GATCCAGCTCTGTCCCAGTAGCTCCAACCCT NGG 10 8 17 8 24 0 100 5 10