Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240606222740_8gxu TAAAAATTAAACTCCAACTGTCCAATGTCTGG(+ATATAT)GATCCAACTCACAATCTTTTGGACAACTCCA NGG 10 8 17 8 24 0 100 5 10
    240606222739_sonz TCTTTTGGAGTTGTCCAAAAGATTGTGAGTTG(+ATATAT)GATCCCAGACATTGGACAGTTGGAGTTTAAT NGG 10 8 17 8 24 0 100 5 10
    240606222737_h0sb CAGCAGTAAAACCCTAACTAAGACAGAAGTTG(+ATATAT)GTACCAGGAGTGGGGTAATGCTGTGATAGGC NGG 10 8 17 8 24 0 100 5 10
    240606222735_km0w GTCAGGCCTATCACAGCATTACCCCACTCCTG(+ATATAT)GTACCAACTTCTGTCTTAGTTAGGGTTTTAC NGG 10 8 17 8 24 0 100 5 10
    240606222734_hkux GCCCTTGGAGGAGCCCAGAAGATCATGAGTTG(+ATATAT)GATCCCAGACGTTGGACAGTTGGAATTTAAT NGG 10 8 17 8 24 0 100 5 10
    240606222732_5agg GAAAAATTAAATTCCAACTGTCCAACGTCTGG(+ATATAT)GATCCAACTCATGATCTTCTGGGCTCCTCCA NGG 10 8 17 8 24 0 100 5 10
    240606222730_9alq ACAGAGGAAGTGTTCTAGAGATAATCAAGGTG(+ATATAT)GTACCTTGTGCTGTGGCTGGACTTGGTAGTG NGG 10 8 17 8 24 0 100 5 10
    240606222729_dnvf TTACACACTACCAAGTCCAGCCACAGCACAAG(+ATATAT)GTACCACCTTGATTATCTCTAGAACACTTCC NGG 10 8 17 8 24 0 100 5 10
    240606222728_anvn TTAATCCTCTAGGAGTTAATCCTCTAGGACTG(+ATATAT)GTACCTACTCAGTTATGGCAAATAGACGTTA NGG 10 8 17 8 24 0 100 5 10
    240606222726_5hqs ATAAGTAACGTCTATTTGCCATAACTGAGTAG(+ATATAT)GTACCAGTCCTAGAGGATTAACTCCTAGAGG NGG 10 8 17 8 24 0 100 5 10