Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240605220847_51do TACTTGTCCTAGCATTCGGAAGAGGAAAGCAG(+CAGTGT)GATCCCAGCAAATAAACCAGCCAGCCAAACA NGG 10 8 17 8 24 0 100 5 10
    240605220845_dcbc TTCTTTGTTTGGCTGGCTGGTTTATTTGCTGG(+CAGTGT)GATCCTGCTTTCCTCTTCCGAATGCTAGGAC NGG 10 8 17 8 24 0 100 5 10
    240605220844_tefh CGCACACAGGTGACAGAGAGCTGGGGCTTCTG(+CAGTGT)GTACCTTAGCTTGGATTCAGACACTCAGGTA NGG 10 8 17 8 24 0 100 5 10
    240605220842_g6ff TGCTTTACCTGAGTGTCTGAATCCAAGCTAAG(+CAGTGT)GTACCAGAAGCCCCAGCTCTCTGTCACCTGT NGG 10 8 17 8 24 0 100 5 10
    240605220840_m4ew CACTGGGAACTGGGATTACAGATGTGAGCAGG(+CAGTGT)GATCCAGCTTGTTACAGACACACCTGGCTGA NGG 10 8 17 8 24 0 100 5 10
    240605220839_0092 TAGTCTCAGCCAGGTGTGTCTGTAACAAGCTG(+CAGTGT)GATCCCTGCTCACATCTGTAATCCCAGTTCC NGG 10 8 17 8 24 0 100 5 10
    240605220838_0jjl CTTCGAACCAAGGCTCTACAAAGCACCTCAGG(+CAGTGT)GTACCTTTCACAGCCCAGAACTCTAGACACA NGG 10 8 17 8 24 0 100 5 10
    240605220836_2w7y CTTCCTGTGTCTAGAGTTCTGGGCTGTGAAAG(+CAGTGT)GTACCCTGAGGTGCTTTGTAGAGCCTTGGTT NGG 10 8 17 8 24 0 100 5 10
    240605220835_10l1 TCAATTGATCGGAGCAGATAAGCAAATGTATG(+CAGTGT)GATCCAGTGGGCCAGTCTAGAGGGAGGCGAG NGG 10 8 17 8 24 0 100 5 10
    240605220833_ueuk ATCTGCTCGCCTCCCTCTAGACTGGCCCACTG(+CAGTGT)GATCCATACATTTGCTTATCTGCTCCGATCA NGG 10 8 17 8 24 0 100 5 10