Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240605025842_vafe AGTGTTGGACTCTGTTTTCTGCAATACAAAGG(+ACTCAC)GTACCACAGCAAACAGAAAGGCCAGCCAGGA NGG 10 8 17 8 24 0 100 5 10
    240605025840_sogx GTCTTTCCTGGCTGGCCTTTCTGTTTGCTGTG(+ACTCAC)GTACCCTTTGTATTGCAGAAAACAGAGTCCA NGG 10 8 17 8 24 0 100 5 10
    240605025839_retk GCAGTGCTGGTGGAGGGTAGAAAAAGTTGCTG(+ACTCAC)GATCCTCTGGAGCTGAAGTTACAGATGGTTG NGG 10 8 17 8 24 0 100 5 10
    240605025837_spr6 CTTCACAACCATCTGTAACTTCAGCTCCAGAG(+ACTCAC)GATCCAGCAACTTTTTCTACCCTCCACCAGC NGG 10 8 17 8 24 0 100 5 10
    240605025835_80i8 TACTGAATTTTTGTCTCATTCACATATTCCAG(+ACTCAC)GTACCAACCACTGTGTGTGACCTACTAAAGA NGG 10 8 17 8 24 0 100 5 10
    240605025834_rtqv TAGTTTCTTTAGTAGGTCACACACAGTGGTTG(+ACTCAC)GTACCTGGAATATGTGAATGAGACAAAAATT NGG 10 8 17 8 24 0 100 5 10
    240605025832_545g GCTGGGAGGGCCGTGTACAGCCCTTGGTCTGG(+ACTCAC)GATCCATGTGTTGGTTGAGAAATCATTCCAG NGG 10 8 17 8 24 0 100 5 10
    240605025831_2fdr ACACTCTGGAATGATTTCTCAACCAACACATG(+ACTCAC)GATCCCAGACCAAGGGCTGTACACGGCCCTC NGG 10 8 17 8 24 0 100 5 10
    240605025829_818q TGTCCCCTCCCTGGTCTTATGCCACTTGCCAG(+ACTCAC)GTACCCTCAGAGCTGTGGGGTGCCTTAGTTC NGG 10 8 17 8 24 0 100 5 10
    240605025828_skcb ACGCAGAACTAAGGCACCCCACAGCTCTGAGG(+ACTCAC)GTACCTGGCAAGTGGCATAAGACCAGGGAGG NGG 10 8 17 8 24 0 100 5 10