Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240604222525_xc2y ACAGCCAGCACAGGAAGGAGCCAGTCATTTCG(+ACTCAC)GTACCTCTGAGGTTCTGAGAGTCGAGGGATA NGG 10 8 17 8 24 0 100 5 10
    240604222524_bvto TGAGTTATCCCTCGACTCTCAGAACCTCAGAG(+ACTCAC)GTACCGAAATGACTGGCTCCTTCCTGTGCTG NGG 10 8 17 8 24 0 100 5 10
    240604222522_7dtz CTATACTCCCAGAACTTAGGATGCTGAAGGAG(+ACTCAC)GATCCAGAGTTGGAGGATAGCCTGGGCTACA NGG 10 8 17 8 24 0 100 5 10
    240604222521_93y5 CACTATGTAGCCCAGGCTATCCTCCAACTCTG(+ACTCAC)GATCCTCCTTCAGCATCCTAAGTTCTGGGAG NGG 10 8 17 8 24 0 100 5 10
    240604222519_qe0b CTGGAGGGCTAGTCCCTAGACGCCGCCCTCTG(+ACTCAC)GATCCGTGCGTCTGAGGACAGCACCCTTGCT NGG 10 8 17 8 24 0 100 5 10
    240604222518_rolf GACAGAGCAAGGGTGCTGTCCTCAGACGCACG(+ACTCAC)GATCCAGAGGGCGGCGTCTAGGGACTAGCCC NGG 10 8 17 8 24 0 100 5 10
    240604222516_yf8r TTCCTTGGGTAACACCACACATACAGGTATGG(+ACTCAC)GATCCCACAACAGACAAATGTACAGACACCA NGG 10 8 17 8 24 0 100 5 10
    240604222514_2gmz TTTGGTGGTGTCTGTACATTTGTCTGTTGTGG(+ACTCAC)GATCCCATACCTGTATGTGTGGTGTTACCCA NGG 10 8 17 8 24 0 100 5 10
    240604222513_ybz6 GGATGGCGGGCAAGGCCTATTAGTTCATCACG(+ACTCAC)GATCCGGTTCAGGTGCCCTAGAGCCCCGCTG NGG 10 8 17 8 24 0 100 5 10
    240604222511_l6us CTAAGCAGCGGGGCTCTAGGGCACCTGAACCG(+ACTCAC)GATCCGTGATGAACTAATAGGCCTTGCCCGC NGG 10 8 17 8 24 0 100 5 10