Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240606180102_q1t7 ATCCATTAATTGGAGACACACACGGGTTACTG(+AAAAAA)GTACCTGTTAATGTATATGCAAATATCTCTT NGG 10 8 17 8 24 0 100 5 10
    240606180101_43ka TCTCTCCTCATTCCTACTCTGAGGTCTCTCAG(+AAAAAA)GATCCCGGTTGCCCCGCACCTCCACTTGTGC NGG 10 8 17 8 24 0 100 5 10
    240606180059_5ezc GGCAGGCACAAGTGGAGGTGCGGGGCAACCGG(+AAAAAA)GATCCTGAGAGACCTCAGAGTAGGAATGAGG NGG 10 8 17 8 24 0 100 5 10
    240606180057_15vr GCTTATCCTCAATCACAAAGAAAAGAAGCTGG(+AAAAAA)GTACCAAAATTCTTTATTTGAAGAAATGGTA NGG 10 8 17 8 24 0 100 5 10
    240606180056_eziv ATTTGTACCATTTCTTCAAATAAAGAATTTTG(+AAAAAA)GTACCCAGCTTCTTTTCTTTGTGATTGAGGA NGG 10 8 17 8 24 0 100 5 10
    240606180054_p9kq GATGTGTCTGCTCAGCTTCTTAGTCTAGCAGG(+AAAAAA)GATCCCCTTCTCTCTGGGAAGAAACTGATTA NGG 10 8 17 8 24 0 100 5 10
    240606180052_1xkg AAAGGTAATCAGTTTCTTCCCAGAGAGAAGGG(+AAAAAA)GATCCCTGCTAGACTAAGAAGCTGAGCAGAC NGG 10 8 17 8 24 0 100 5 10
    240606180051_r28x ACAACGTCTGTGTTAGCGTTCTTGGGAAAGAG(+AAAAAA)GATCCTTAATCGATACACTTGCCATATCCAG NGG 10 8 17 8 24 0 100 5 10
    240606180050_j4ee GTTCCCTGGATATGGCAAGTGTATCGATTAAG(+AAAAAA)GATCCTCTTTCCCAAGAACGCTAACACAGAC NGG 10 8 17 8 24 0 100 5 10
    240606180047_zkoc CTGGTGGCTGGTCTGTCATTCTGTTTACCCTG(+AAAAAA)GATCCTCTTTATGTCATGGCTGACAATTAGT NGG 10 8 17 8 24 0 100 5 10