Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240607040850_m3u9 TTAGCTCCTAATATGTCCCTTCTCTCACACTG(+ATATAT)GTACCTCAATTTATGAGTTAAAACTGGCTCT NGG 10 8 17 8 24 0 100 5 10
    240607040848_3hl8 TTTAGAGAGCCAGTTTTAACTCATAAATTGAG(+ATATAT)GTACCAGTGTGAGAGAAGGGACATATTAGGA NGG 10 8 17 8 24 0 100 5 10
    240607040846_8i5o GCAGATGGCGTTAAGTGATGTTACTGTCCTGG(+ATATAT)GTACCTAGAGCCTTTAGTTCATGACACGCTG NGG 10 8 17 8 24 0 100 5 10
    240607040845_ait3 GCAAGCAGCGTGTCATGAACTAAAGGCTCTAG(+ATATAT)GTACCCAGGACAGTAACATCACTTAACGCCA NGG 10 8 17 8 24 0 100 5 10
    240607040844_tgyb TACCTTAGATCGCACAAAAATGCATAATCATG(+ATATAT)GATCCCCTACTCTCCCAGTAGTCAAGTTCTT NGG 10 8 17 8 24 0 100 5 10
    240607040842_izfl TTCCTAAGAACTTGACTACTGGGAGAGTAGGG(+ATATAT)GATCCATGATTATGCATTTTTGTGCGATCTA NGG 10 8 17 8 24 0 100 5 10
    240607040841_0ew8 TCCATGTGGCAACTCAGACCTGCCTAAAACTG(+ATATAT)GATCCCCTCTTCTGACCTTCATAGTCATCAC NGG 10 8 17 8 24 0 100 5 10
    240607040839_2tsv ATTGTGTGATGACTATGAAGGTCAGAAGAGGG(+ATATAT)GATCCAGTTTTAGGCAGGTCTGAGTTGCCAC NGG 10 8 17 8 24 0 100 5 10
    240607040838_j2rc TGCGATGCATTACATTAGCCGAGGCACTTCAG(+ATATAT)GATCCTTCTTATACCCATTCTCTCAACAACT NGG 10 8 17 8 24 0 100 5 10
    240607040837_0zaz ACAAAAGTTGTTGAGAGAATGGGTATAAGAAG(+ATATAT)GATCCTGAAGTGCCTCGGCTAATGTAATGCA NGG 10 8 17 8 24 0 100 5 10