Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240607025715_09ic ATCCATGATGACTTCCAAGGACTGTGTGTTAG(+ATATAT)GTACCCGAAAAAGCTCCAAAGCTTGAATCAG NGG 10 8 17 8 24 0 100 5 10
    240607025713_n2om ATAGTCTGATTCAAGCTTTGGAGCTTTTTCGG(+ATATAT)GTACCTAACACACAGTCCTTGGAAGTCATCA NGG 10 8 17 8 24 0 100 5 10
    240607025711_mme4 TGCTAAGCATGATCTAGAATAGAAGCCACTGG(+ATATAT)GTACCCCTAACTATATTTAGTGATTTAGAAC NGG 10 8 17 8 24 0 100 5 10
    240607025710_jgv1 GCTGAGTTCTAAATCACTAAATATAGTTAGGG(+ATATAT)GTACCCAGTGGCTTCTATTCTAGATCATGCT NGG 10 8 17 8 24 0 100 5 10
    240607025708_6q3f CAGTGCTCACCAGCTGTGATGTTGAAAACAAG(+ATATAT)GATCCAAAGGTGGACATTGACGATTTGAGGT NGG 10 8 17 8 24 0 100 5 10
    240607025706_s3us TCCAGACCTCAAATCGTCAATGTCCACCTTTG(+ATATAT)GATCCTTGTTTTCAACATCACAGCTGGTGAG NGG 10 8 17 8 24 0 100 5 10
    240607025704_vza2 GTTAAATATATCTACTCTTTTTATATTCCTGG(+ATATAT)GATCCAGGATGAAAAAAAATTTAAATATACA NGG 10 8 17 8 24 0 100 5 10
    240607025702_0nxt TCAGATGTATATTTAAATTTTTTTTCATCCTG(+ATATAT)GATCCCAGGAATATAAAAAGAGTAGATATAT NGG 10 8 17 8 24 0 100 5 10
    240607025701_pp0f TCAAGGAAAATTGATTTGAAGTATAGACACTG(+ATATAT)GATCCCCAATCTCTTAAAAATTGCTTCTATT NGG 10 8 17 8 24 0 100 5 10
    240607025659_zcdl TTGTTAATAGAAGCAATTTTTAAGAGATTGGG(+ATATAT)GATCCAGTGTCTATACTTCAAATCAATTTTC NGG 10 8 17 8 24 0 100 5 10