Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240607002939_3r78 GGAGGATGAGATCAGTCCTGCAGAGCAGAAAG(+ATATAT)GTACCCCTGGGGCTGATGTCAGCATCTAGCA NGG 10 8 17 8 24 0 100 5 10
    240607002937_onu8 CTTTCCTGGAACTCAAGATCATCTTGCCTTAG(+ATATAT)GATCCCAAACACTGCAATTACAGACTTGTGC NGG 10 8 17 8 24 0 100 5 10
    240607002935_6fpv GAGTGGCACAAGTCTGTAATTGCAGTGTTTGG(+ATATAT)GATCCTAAGGCAAGATGATCTTGAGTTCCAG NGG 10 8 17 8 24 0 100 5 10
    240607002934_3d09 GGATCCCTCCTGGGCTTGTCAGAGAGTTTTGG(+ATATAT)GTACCAAAGAGGTCTAGTAGACTCCCCAGAA NGG 10 8 17 8 24 0 100 5 10
    240607002933_4mks GCCACTTCTGGGGAGTCTACTAGACCTCTTTG(+ATATAT)GTACCCAAAACTCTCTGACAAGCCCAGGAGG NGG 10 8 17 8 24 0 100 5 10
    240607002931_5ytv CACCTGCAACCTTCCACGGTGCATGCTCTGTG(+ATATAT)GATCCCTCCTGGGCTTGTCAGAGAGTTTTGG NGG 10 8 17 8 24 0 100 5 10
    240607002930_wwp5 GGTACCCAAAACTCTCTGACAAGCCCAGGAGG(+ATATAT)GATCCACAGAGCATGCACCGTGGAAGGTTGC NGG 10 8 17 8 24 0 100 5 10
    240607002928_jdpy CCCATTACGCCTGGTACAAGTCTGTCCTCAGG(+ATATAT)GATCCAGTGTGAGAAATACAGATGGATGGCC NGG 10 8 17 8 24 0 100 5 10
    240607002926_0mku TGCGAGGCCATCCATCTGTATTTCTCACACTG(+ATATAT)GATCCCTGAGGACAGACTTGTACCAGGCGTA NGG 10 8 17 8 24 0 100 5 10
    240607002925_u8cy GGGGGGAACGGCAGCTGAGCAGGTGTAGGGTG(+ATATAT)GATCCTGCTGGTGACCAGGGCAGTCATCCAT NGG 10 8 17 8 24 0 100 5 10