Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240606122601_s9mu GGATGGACCATGTAGAGACTGTCATATCCAGG(+AAAAAA)GATCCACCCCATAATCAGCATCCAAACGCTG NGG 10 8 17 8 24 0 100 5 10
    240606122559_zqme GGTGTCAGCGTTTGGATGCTGATTATGGGGTG(+AAAAAA)GATCCCTGGATATGACAGTCTCTACATGGTC NGG 10 8 17 8 24 0 100 5 10
    240606122558_gvs3 CGTGGGTGGGGTCGATGGTCAGCTACATTGAG(+AAAAAA)GATCCAAGAATGGCAGCAGTGCCTGCACCCC NGG 10 8 17 8 24 0 100 5 10
    240606122557_hnu0 CCAGTGGGGTGCAGGCACTGCTGCCATTCTTG(+AAAAAA)GATCCTCAATGTAGCTGACCATCGACCCCAC NGG 10 8 17 8 24 0 100 5 10
    240606122555_y8oc GCATATAAGCCCCCCTGTTCTATGAGATCTGG(+AAAAAA)GTACCCTCACTGCCTTCCCAGCTCCGAGTCT NGG 10 8 17 8 24 0 100 5 10
    240606122554_kph3 CATGGAGACTCGGAGCTGGGAAGGCAGTGAGG(+AAAAAA)GTACCCAGATCTCATAGAACAGGGGGGCTTA NGG 10 8 17 8 24 0 100 5 10
    240606122551_rhm5 AAAATGTCCTTGATAATAAATGGTATGGCCCG(+AAAAAA)GATCCTATTTTGATAAGATCCAGGGGAGCTA NGG 10 8 17 8 24 0 100 5 10
    240606122550_7qon ACAGATAGCTCCCCTGGATCTTATCAAAATAG(+AAAAAA)GATCCGGGCCATACCATTTATTATCAAGGAC NGG 10 8 17 8 24 0 100 5 10
    240606122549_8yyk GCTATATAGCATTGATCAAATACTTAAATAAG(+AAAAAA)GATCCCAAGCAAGATCTATAGATTGTTGGGA NGG 10 8 17 8 24 0 100 5 10
    240606122547_vfym GTGCATCCCAACAATCTATAGATCTTGCTTGG(+AAAAAA)GATCCTTATTTAAGTATTTGATCAATGCTAT NGG 10 8 17 8 24 0 100 5 10