Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240605131538_rx50 TCTCCTGCTGCCTCCCTAGGGGAGCCATCATG(+CAGTGT)GTACCCAGTCCCTCCTCTGCAGCATCCAGCT NGG 10 8 17 8 24 0 100 5 10
    240605131536_lyzr GGTACAGCTGGATGCTGCAGAGGAGGGACTGG(+CAGTGT)GTACCATGATGGCTCCCCTAGGGAGGCAGCA NGG 10 8 17 8 24 0 100 5 10
    240605131535_sy0n TCTCCTGCTGCCTCCCTAGGGGAGCCATCATG(+CAGTGT)GTACCCAGTCCCTCCTCTGCAGCATCCAGCT NGG 10 8 17 8 24 0 100 5 10
    240605131534_3iap GTGTGTGGTTTCCATCCCAAGGATGCCTGGTG(+CAGTGT)GTACCACGGCTCCCAGGAAGAAGGTTGGAGA NGG 10 8 17 8 24 0 100 5 10
    240605131532_vms9 CACACTCTCCAACCTTCTTCCTGGGAGCCGTG(+CAGTGT)GTACCACCAGGCATCCTTGGGATGGAAACCA NGG 10 8 17 8 24 0 100 5 10
    240605131530_7j8f GCCACCCAGACTGTGGTAGCTTGGCATGAATG(+CAGTGT)GTACCGGCTGTTCTTATGAGTGTGAATGTGT NGG 10 8 17 8 24 0 100 5 10
    240605131528_ltaf CACATACACATTCACACTCATAAGAACAGCCG(+CAGTGT)GTACCATTCATGCCAAGCTACCACAGTCTGG NGG 10 8 17 8 24 0 100 5 10
    240605131527_fjpn CCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAG(+CAGTGT)GTACCACATTCTCACTCAAAAAAAAACAAAC NGG 10 8 17 8 24 0 100 5 10
    240605131526_27i1 TTGGAGTTTGTTTTTTTTTGAGTGAGAATGTG(+CAGTGT)GTACCTTTTTGGCCCTGCCTTCCCACAGGGG NGG 10 8 17 8 24 0 100 5 10
    240605131524_86hg TTTATAGACCTCTTTCAGCTATTTTAATAAAG(+CAGTGT)GATCCTTTGGAATTTATCCCCAGCCGATGCT NGG 10 8 17 8 24 0 100 5 10