Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240605025214_g8z4 AATCCTCATTCATAACTTCACTTGTCCCCAAG(+ACTCAC)GTACCATGTGGGCCACCTAGAAGAGGTTCAC NGG 10 8 17 8 24 0 100 5 10
    240605025212_i1qu GTTAAGTGAACCTCTTCTAGGTGGCCCACATG(+ACTCAC)GTACCTTGGGGACAAGTGAAGTTATGAATGA NGG 10 8 17 8 24 0 100 5 10
    240605025209_vcgi AATCCTCATTCATAACTTCACTTGTCCCCAAG(+ACTCAC)GTACCATGTGGGCCACCTAGAAGAGGTTCAC NGG 10 8 17 8 24 0 100 5 10
    240605025208_mxhe AGTACTTGTAAACCTAGGTGATTCTATCTTTG(+ACTCAC)GTACCATTGTGAGCAGTACTCCCCAGCCTCT NGG 10 8 17 8 24 0 100 5 10
    240605025207_zud2 GCAGCAGAGGCTGGGGAGTACTGCTCACAATG(+ACTCAC)GTACCAAAGATAGAATCACCTAGGTTTACAA NGG 10 8 17 8 24 0 100 5 10
    240605025206_7ipk GCCTGCCGTGTGAGGCCCAACGCATAGAGCAG(+ACTCAC)GTACCTGACTGCGTCCAGCCTTTCTGGGCAG NGG 10 8 17 8 24 0 100 5 10
    240605025204_qtkc CCAAGCTGCCCAGAAAGGCTGGACGCAGTCAG(+ACTCAC)GTACCTGCTCTATGCGTTGGGCCTCACACGG NGG 10 8 17 8 24 0 100 5 10
    240605025203_kans CCGCTGGATGCATGGCCTGTGGGACCTCTGTG(+ACTCAC)GTACCAGAGGTCCATTCCGTTCCTTCGCAGC NGG 10 8 17 8 24 0 100 5 10
    240605025201_svjj GGGAGGCTGCGAAGGAACGGAATGGACCTCTG(+ACTCAC)GTACCACAGAGGTCCCACAGGCCATGCATCC NGG 10 8 17 8 24 0 100 5 10
    240605025159_wtmh CATTCCAGGTTCTAGAGCTTTCTATGGGGCGG(+ACTCAC)GTACCTCGGTGCGCATAGGGAATGAGGACGA NGG 10 8 17 8 24 0 100 5 10