Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240606150727_j39a ACATGAGCTCACCAGGAGCTGCTGTTTTCTGG(+AAAAAA)GTACCTTCTGTAGAGAACTTACCCATCACAT NGG 10 8 17 8 24 0 100 5 10
    240606150726_uf06 CACCCATGTGATGGGTAAGTTCTCTACAGAAG(+AAAAAA)GTACCCAGAAAACAGCAGCTCCTGGTGAGCT NGG 10 8 17 8 24 0 100 5 10
    240606150724_01l5 CCTCTAAAGGAGGATTAAGAAGGTAAGAGTTG(+AAAAAA)GTACCTAACCTAGATATGGAAGACTTAGTCA NGG 10 8 17 8 24 0 100 5 10
    240606150723_4g76 TATTGTGACTAAGTCTTCCATATCTAGGTTAG(+AAAAAA)GTACCAACTCTTACCTTCTTAATCCTCCTTT NGG 10 8 17 8 24 0 100 5 10
    240606150722_0qjp TTCATCTCTCTGAACACGTTTATCCCAACCTG(+AAAAAA)GATCCAGGCTGCAGTAAGTGCTCAGTGGGGT NGG 10 8 17 8 24 0 100 5 10
    240606150720_0omj GCTCAACCCCACTGAGCACTTACTGCAGCCTG(+AAAAAA)GATCCAGGTTGGGATAAACGTGTTCAGAGAG NGG 10 8 17 8 24 0 100 5 10
    240606150718_sgy8 ACAGGTAAAGGAATTAGGCTTGGGGGACTTGG(+AAAAAA)GATCCTAGGGAAGAAAGCTCGGGCGATCGGC NGG 10 8 17 8 24 0 100 5 10
    240606150716_jb6k ACTCAGCCGATCGCCCGAGCTTTCTTCCCTAG(+AAAAAA)GATCCCAAGTCCCCCAAGCCTAATTCCTTTA NGG 10 8 17 8 24 0 100 5 10
    240606150714_s2ke CTGGTGACAAATGGCAGATGTGCCATATATGG(+AAAAAA)GATCCTTTACTTGGAAAGAAATTAGTCAGGG NGG 10 8 17 8 24 0 100 5 10
    240606150713_mytj CCTTCCCCTGACTAATTTCTTTCCAAGTAAAG(+AAAAAA)GATCCCATATATGGCACATCTGCCATTTGTC NGG 10 8 17 8 24 0 100 5 10