Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240605230056_gqzo TCAAAATATAACTAAATACTGGTAACAATTTG(+CAGTGT)GTACCCAGCACTCTTAGAAGAGAACAGGTTG NGG 10 8 17 8 24 0 100 5 10
    240605230055_0z8w ATTGGCAACCTGTTCTCTTCTAAGAGTGCTGG(+CAGTGT)GTACCAAATTGTTACCAGTATTTAGTTATAT NGG 10 8 17 8 24 0 100 5 10
    240605230054_g5cn AGCAGACACTGTGCCCTTAGCCTGCTGGCAAG(+CAGTGT)GTACCCAAGAAGATGGAGGACTTTGAAGCCA NGG 10 8 17 8 24 0 100 5 10
    240605230052_04r9 GCTCCTGGCTTCAAAGTCCTCCATCTTCTTGG(+CAGTGT)GTACCTTGCCAGCAGGCTAAGGGCACAGTGT NGG 10 8 17 8 24 0 100 5 10
    240605230049_ogok GAAAGGGAAGAGCAGGAATGCCCTGGGCCCGG(+CAGTGT)GATCCCCGCATTGCACGTTGCATGCGGATGG NGG 10 8 17 8 24 0 100 5 10
    240605230047_6i9y ATGGTCCATCCGCATGCAACGTGCAATGCGGG(+CAGTGT)GATCCCGGGCCCAGGGCATTCCTGCTCTTCC NGG 10 8 17 8 24 0 100 5 10
    240605230045_ae29 GTCTGCCTTCAGCTCCCAACCCTAACCTCCTG(+CAGTGT)GATCCCCAAGCCATGTTTCTCCCACAGGTGG NGG 10 8 17 8 24 0 100 5 10
    240605230043_7gvy TGCATCCACCTGTGGGAGAAACATGGCTTGGG(+CAGTGT)GATCCAGGAGGTTAGGGTTGGGAGCTGAAGG NGG 10 8 17 8 24 0 100 5 10
    240605230041_b48j CACAGAGCATCTCAGTTGGACTGGACCACCAG(+CAGTGT)GATCCCCAGAGCCAGCCTTCCCCACCTCCCC NGG 10 8 17 8 24 0 100 5 10
    240605230039_26ru GGACAGGGGAGGTGGGGAAGGCTGGCTCTGGG(+CAGTGT)GATCCTGGTGGTCCAGTCCAACTGAGATGCT NGG 10 8 17 8 24 0 100 5 10