Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240605224647_kjc4 ACACAAGTCAATCTGTCATGACGTGCCAACTG(+CAGTGT)GATCCATCAGATGTACTGGTGGCACTCAATG NGG 10 8 17 8 24 0 100 5 10
    240605224645_wapq AGGACGGAGCCTAGGACTCTGTACCTGCCAAG(+CAGTGT)GATCCCAGAGCCCAAGTATGTGGGGCTTTGG NGG 10 8 17 8 24 0 100 5 10
    240605224644_f0b4 CCAAACCAAAGCCCCACATACTTGGGCTCTGG(+CAGTGT)GATCCTTGGCAGGTACAGAGTCCTAGGCTCC NGG 10 8 17 8 24 0 100 5 10
    240605224641_8vdk AAGAAAAGGAGCATGAAAAACCATATCCCAGG(+CAGTGT)GTACCTTTTCATGAGTTGATGTCCCTTCCAC NGG 10 8 17 8 24 0 100 5 10
    240605224640_61yq TATTGGTGGAAGGGACATCAACTCATGAAAAG(+CAGTGT)GTACCCTGGGATATGGTTTTTCATGCTCCTT NGG 10 8 17 8 24 0 100 5 10
    240605224638_lowk GGGAGGTCTGAAAGTAATTGCTACAAAAGTTG(+CAGTGT)GTACCTAAAAATGCTGTGGTGCCCCACAGAA NGG 10 8 17 8 24 0 100 5 10
    240605224637_1qhw CATATTTCTGTGGGGCACCACAGCATTTTTAG(+CAGTGT)GTACCAACTTTTGTAGCAATTACTTTCAGAC NGG 10 8 17 8 24 0 100 5 10
    240605224636_yrkv ATGCTAACTACTGACGGTATCTCCTTCTTTAG(+CAGTGT)GATCCGAATGCACAGCATGCTCAGATGGTCA NGG 10 8 17 8 24 0 100 5 10
    240605224635_eaql CACTTTGACCATCTGAGCATGCTGTGCATTCG(+CAGTGT)GATCCTAAAGAAGGAGATACCGTCAGTAGTT NGG 10 8 17 8 24 0 100 5 10
    240605224633_9tc9 AGACACTAAGATATATCCTGAAGTAGTACGTG(+CAGTGT)GATCCTCAGACCAGAAAAATTTTTAACATTC NGG 10 8 17 8 24 0 100 5 10