Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240605203817_60z8 GAGCCAGAGGTCAGAGTGACCAAGGGTGGAGG(+CAGTGT)GATCCTGGGCCATGGGTGTCCGGCTGTCAAT NGG 10 8 17 8 24 0 100 5 10
    240605203816_1ets GGAGGGCTCATCGACAAGTAGCCCCCAGCTGG(+CAGTGT)GATCCGCAACATCCACCTCCATCTCCTCAGA NGG 10 8 17 8 24 0 100 5 10
    240605203814_17jc ACGGATCTGAGGAGATGGAGGTGGATGTTGCG(+CAGTGT)GATCCCAGCTGGGGGCTACTTGTCGATGAGC NGG 10 8 17 8 24 0 100 5 10
    240605203813_ah38 TCCTCCTTCCCCTGGCTAGCACTCTGGTCAGG(+CAGTGT)GTACCCCTTTATTCTGCTGCAGAGATCTTAA NGG 10 8 17 8 24 0 100 5 10
    240605203811_91r8 TGTGTTTAAGATCTCTGCAGCAGAATAAAGGG(+CAGTGT)GTACCCTGACCAGAGTGCTAGCCAGGGGAAG NGG 10 8 17 8 24 0 100 5 10
    240605203809_08ph CCATTCCCCCATTCGACATGGGATTTCACCAG(+CAGTGT)GATCCACCTATATCCCCCTTTTTTTGAAAGA NGG 10 8 17 8 24 0 100 5 10
    240605203807_vgbv AAATATCTTTCAAAAAAAGGGGGATATAGGTG(+CAGTGT)GATCCTGGTGAAATCCCATGTCGAATGGGGG NGG 10 8 17 8 24 0 100 5 10
    240605203806_nldh GTGTATGTTAGTGGCAGGAAATTCAGAGTTGG(+CAGTGT)GATCCCTGATAGGAGGCAGATCCTGGACTGG NGG 10 8 17 8 24 0 100 5 10
    240605203804_fm46 CGCGCCCAGTCCAGGATCTGCCTCCTATCAGG(+CAGTGT)GATCCCAACTCTGAATTTCCTGCCACTAACA NGG 10 8 17 8 24 0 100 5 10
    240605203802_et8w GTGTATGTTAGTGGCAGGAAATTCAGAGTTGG(+CAGTGT)GATCCCTGATAGGAGGCAGATCCTGGACTGG NGG 10 8 17 8 24 0 100 5 10