Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240604195930_lq38 TCTATTATTTTAGCTGGGGATACGTTTGGATG(+ACTCAC)GATCCACAACAATGGCCCATTCTGCCACAAA NGG 10 8 17 8 24 0 100 5 10
    240604195928_bugy AAAATGTCCTTGATAATAAATGGTATGGCCCG(+ACTCAC)GATCCTATTTTGATAAGATCCAGGGGAGCTA NGG 10 8 17 8 24 0 100 5 10
    240604195927_7ool ACAGATAGCTCCCCTGGATCTTATCAAAATAG(+ACTCAC)GATCCGGGCCATACCATTTATTATCAAGGAC NGG 10 8 17 8 24 0 100 5 10
    240604195925_15yt TAGTCCACTGCCAAGTGTGGCCCTAGGCATGG(+ACTCAC)GATCCCGGGGGCTCCAGGAAAATGCTATTGT NGG 10 8 17 8 24 0 100 5 10
    240604195922_tjrk ATGACACAATAGCATTTTCCTGGAGCCCCCGG(+ACTCAC)GATCCCATGCCTAGGGCCACACTTGGCAGTG NGG 10 8 17 8 24 0 100 5 10
    240604195921_2fxf AAAAAAACAAACAAAGCAAAAACAAACAAAAG(+ACTCAC)GATCCCCTAGAAACAGTAAGGTAAATCTATT NGG 10 8 17 8 24 0 100 5 10
    240604195919_67ar AGAAAAATAGATTTACCTTACTGTTTCTAGGG(+ACTCAC)GATCCTTTTGTTTGTTTTTGCTTTGTTTGTT NGG 10 8 17 8 24 0 100 5 10
    240604195917_nqc2 TTAGGTAAAATTATAGGAAAAATTATTGAAAG(+ACTCAC)GTACCCTTCAATGGACAGTGTCATCTATTTC NGG 10 8 17 8 24 0 100 5 10
    240604195916_l3p8 TACTAGAAATAGATGACACTGTCCATTGAAGG(+ACTCAC)GTACCTTTCAATAATTTTTCCTATAATTTTA NGG 10 8 17 8 24 0 100 5 10
    240604195914_5sie TCTAGAAAGCATATTTAAAATCGTTGGTATCG(+ACTCAC)GTACCAGGAGAAGCCAGGCTAAGAAATAAAG NGG 10 8 17 8 24 0 100 5 10