Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240607034320_1jhr TTCTTTGTTTGGCTGGCTGGTTTATTTGCTGG(+ATATAT)GATCCTGCTTTCCTCTTCCGAATGCTAGGAC NGG 10 8 17 8 24 0 100 5 10
    240607034319_wklb CGCACACAGGTGACAGAGAGCTGGGGCTTCTG(+ATATAT)GTACCTTAGCTTGGATTCAGACACTCAGGTA NGG 10 8 17 8 24 0 100 5 10
    240607034318_9stl TGCTTTACCTGAGTGTCTGAATCCAAGCTAAG(+ATATAT)GTACCAGAAGCCCCAGCTCTCTGTCACCTGT NGG 10 8 17 8 24 0 100 5 10
    240607034316_rdj8 CACTGGGAACTGGGATTACAGATGTGAGCAGG(+ATATAT)GATCCAGCTTGTTACAGACACACCTGGCTGA NGG 10 8 17 8 24 0 100 5 10
    240607034315_wdio TAGTCTCAGCCAGGTGTGTCTGTAACAAGCTG(+ATATAT)GATCCCTGCTCACATCTGTAATCCCAGTTCC NGG 10 8 17 8 24 0 100 5 10
    240607034314_hc97 CTTCGAACCAAGGCTCTACAAAGCACCTCAGG(+ATATAT)GTACCTTTCACAGCCCAGAACTCTAGACACA NGG 10 8 17 8 24 0 100 5 10
    240607034312_034o CTTCCTGTGTCTAGAGTTCTGGGCTGTGAAAG(+ATATAT)GTACCCTGAGGTGCTTTGTAGAGCCTTGGTT NGG 10 8 17 8 24 0 100 5 10
    240607034311_caef TCAATTGATCGGAGCAGATAAGCAAATGTATG(+ATATAT)GATCCAGTGGGCCAGTCTAGAGGGAGGCGAG NGG 10 8 17 8 24 0 100 5 10
    240607034309_220c ATCTGCTCGCCTCCCTCTAGACTGGCCCACTG(+ATATAT)GATCCATACATTTGCTTATCTGCTCCGATCA NGG 10 8 17 8 24 0 100 5 10
    240607034308_qyka GCCTGTCATGGTATACCCCTGCTAGCCTTGGG(+ATATAT)GATCCATAAGGAGACCCCTAGCATGGCCCTG NGG 10 8 17 8 24 0 100 5 10