Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240606221905_1cqn TGCTGAGACACAGAATGAGTTTTATGGCAAAG(+ATATAT)GATCCTTAATCCCCAGAGACGCTTTGGCTTG NGG 10 8 17 8 24 0 100 5 10
    240606221904_9ytl CACCACAAGCCAAAGCGTCTCTGGGGATTAAG(+ATATAT)GATCCTTTGCCATAAAACTCATTCTGTGTCT NGG 10 8 17 8 24 0 100 5 10
    240606221902_51jr TTTCTCTGGAGTCCTTCTTGGAGAAAACCAGG(+ATATAT)GATCCAGGTTCATCGCCGAGGCCCTCGGAGC NGG 10 8 17 8 24 0 100 5 10
    240606221900_iwm1 GCCCCGCTCCGAGGGCCTCGGCGATGAACCTG(+ATATAT)GATCCCTGGTTTTCTCCAAGAAGGACTCCAG NGG 10 8 17 8 24 0 100 5 10
    240606221857_up9t CATTGTGCCTCTGAGACATCCTTAGGGCTGGG(+ATATAT)GTACCCAGCTCTCGAAGACACCATGCCATGA NGG 10 8 17 8 24 0 100 5 10
    240606221856_uexq AGAAGTCATGGCATGGTGTCTTCGAGAGCTGG(+ATATAT)GTACCCCAGCCCTAAGGATGTCTCAGAGGCA NGG 10 8 17 8 24 0 100 5 10
    240606221854_jsz9 ACTAACATCTCCCTCTCCCTCTCTTGCTATGG(+ATATAT)GATCCCAATGGTACTGCAGGCAACACAGTAC NGG 10 8 17 8 24 0 100 5 10
    240606221851_s7zx GACTGGTACTGTGTTGCCTGCAGTACCATTGG(+ATATAT)GATCCCATAGCAAGAGAGGGAGAGGGAGATG NGG 10 8 17 8 24 0 100 5 10
    240606221848_pyea GGCTCTTCTGGCTTTTACCTTCACCGATGGGG(+ATATAT)GTACCTGGTGTCCTGAGGTGGCCAAGTGAGC NGG 10 8 17 8 24 0 100 5 10
    240606221845_93p5 TGTAGGCTCACTTGGCCACCTCAGGACACCAG(+ATATAT)GTACCCCCATCGGTGAAGGTAAAAGCCAGAA NGG 10 8 17 8 24 0 100 5 10