Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    240605215511_647n GGTTTAGGGAGATCTGGTTGAGTTATCAAGTG(+CAGTGT)GATCCTAAAGGAAATTCTTGAGCCTAAAGGA NGG 10 8 17 8 24 0 100 5 10
    240605215510_wwv0 CATTTTCCTTTAGGCTCAAGAATTTCCTTTAG(+CAGTGT)GATCCACTTGATAACTCAACCAGATCTCCCT NGG 10 8 17 8 24 0 100 5 10
    240605215508_x9vn AAGGCTCTAAAGTGAGTAGGTCATTCCCTAGG(+CAGTGT)GATCCTACAGATCACCCCCTGTTAAATCTAC NGG 10 8 17 8 24 0 100 5 10
    240605215506_k1yh TATAGGTAGATTTAACAGGGGGTGATCTGTAG(+CAGTGT)GATCCCTAGGGAATGACCTACTCACTTTAGA NGG 10 8 17 8 24 0 100 5 10
    240605215504_n522 CCAGAGTGCCAAGCTCTCTGTTCCTCTCCAAG(+CAGTGT)GATCCCCTGGCCCTCACTGTGACGGACGGAC NGG 10 8 17 8 24 0 100 5 10
    240605215502_9j51 ACTCCGTCCGTCCGTCACAGTGAGGGCCAGGG(+CAGTGT)GATCCTTGGAGAGGAACAGAGAGCTTGGCAC NGG 10 8 17 8 24 0 100 5 10
    240605215500_evrc CGTGCTCTTAGGTCGTTTTATTTTACAATCTG(+CAGTGT)GATCCGAGGTGGCAGATTTAAGACAGGTTCT NGG 10 8 17 8 24 0 100 5 10
    240605215459_v70o TCTACAGAACCTGTCTTAAATCTGCCACCTCG(+CAGTGT)GATCCAGATTGTAAAATAAAACGACCTAAGA NGG 10 8 17 8 24 0 100 5 10
    240605215457_v2vx ATGCAACAGCCTGCAAAGGCCATAGGGTGTTG(+CAGTGT)GATCCCTGGAACTGGAGTTACAGGAGGTTGA NGG 10 8 17 8 24 0 100 5 10
    240605215455_bute TTTCCTCAACCTCCTGTAACTCCAGTTCCAGG(+CAGTGT)GATCCAACACCCTATGGCCTTTGCAGGCTGT NGG 10 8 17 8 24 0 100 5 10