Enter the sequence


Example input
More Parameters

Example for substitution:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGA(/T)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for insertion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTG(+ATT)GCGCGAGGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Example for deletion:

CGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGC(-GCTGGCGCGA)GGCCGCCTGGCAACTCTGCGACTACTACCTGCC

Above three examples above represent the input formats of three different editing types.

  • The bases to be edited are marked with a pair of parentheses "()".

  • Substitution is indicated by backslash "/", and the example is used to replace A by T.

  • Insertion is indicated by plus sign "+", and the example indicates that ATT will be inserted at the parenthesis position

  • Deletion is indicated by minus sign "-", and the example indicates that GCTGGCGCGA will be deleted at the parenthesis position.

    • PAM Maximum Edit-to-Nick Distance
    Maximum PBS Length Maximum RTT Length
    Minimum PBS Length Minimum RTT Length
    Number of Optimized pegRNAs Assembly
    Minimum Nick-to-Nick Distance Maximum Nick-to-Nick Distance
    Minimum Downstream Homology

    Use an example: Substitution Insertion Deletion
    Example for FASTA file History
    UID Input sequence PAM CUT SIZE MIN PBS MAX PBS MIN RT MAX RT MIN DIS SGRNA MAX DIS SGRNA HOMOLOGY Number show
    250908090534_8s85isuf CTTAATCTCTGTCTTGACTACCAGACTATCATGATGTTTGTTGGAACTGTAATTCCTGCTCTCCATTTCTCTCTGTCCCCCAAGTTGAAAATATAACCCAA(/C)ATCTTTAGAATTTTTGCCTCTCATTCCTTGCAACTCCAGTGGGCTAGAATCTTGATCCAGTTTTCTCCAGACTAGATTTCAAGCTACTATGCATGATGTAG NG 10 8 17 8 24 0 100 5 10
    250908090534_8s85iqbw AGAAACTCAAATTGTTCCTGGGCAAATCACAACATGGGGAATTTTATTCATAAATGTCCACAGAAACAGTAAATGTTCTCGCTTCAGTACTTAATTCATCT(/G)AATCCCTCCTGTTTGTCTCAAATTATAGGATAACTTTGAAACTTTCTGAATTAACGTTATTTAAAAGGAAATGTAGATGTTATTTTAGTCTCTATCTTCAT NG 10 8 17 8 24 0 100 5 10
    250908090534_8s85hhmv AAGTTAGCCACTGAATAGTCATCTCAGAATAGTCACCTCATCCCAGTTGGCCCATTAGGTTCCTGTGTGCTTCATCTTCTGTGAGAAAAAAAAACCTTATA(/C)TCATTCCTTATTTCAGATGTAAGATGCCAGGTGAGTTATTTTCCACAAATTTCTTAAGCTCATTACTGGAAAAAAAAATTTCTCAAAACTTTTAGTAATGA NG 10 8 17 8 24 0 100 5 10
    250908090534_8s85h4qk ACAGATACAATGTTGAATAAGGCAAAGCACCTGCCCTCAGGTAGCTTGCAGTCAGGGAGGTAAGGGTAGTGGGCAGAGAGACCTGGAAACAGATATTAGAC(/A)CTGCACTAAGCATGTGTGGTTATTGAACAGTAAAAATGCCACCACAAATTGCGATATGATGTAAGTAAAATGCGTACTGGCTATTGAAGACTTGGCACAGA NG 10 8 17 8 24 0 100 5 10
    250908090534_8s85ggaf GAGCCCAGCAAATAATTATGGGGTCCCTGTTAGTGAATTAAATCAATTCTGCATCATCCACATATGGATTAGCCATGTTGTGGACAGTGCAAGTACTTTTC(/T)AAATCTCCAGATTTCCCTATTACTCAAGAGCTGGTGATCTGAAACAAGAAAATTTGAGCTGTTCAAGTCCCAACAGCTTAATTTTGTGTGTCCATGGGCAC NG 10 8 17 8 24 0 100 5 10
    250908090534_8s85f79x CTAAAAGAATATATAAAGCATTTACTTTAGGAAGAAGGAAAATGATCCTAAAAGGAAGAACCAAGAAGCAAGTAGCAATAGTGAGGCAATTGTGAAAATGT(/C)AGGTAAGTCTAAACACACTCTGTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTTTGAGACTGAGTCTTGCCCTGTCACCCAGACTGGAGTGC NG 10 8 17 8 24 0 100 5 10
    250908090534_8s85f76d CCCTCCGGCGCTCATGTTCCGAGTCTGCAGCTCCACACTTTAAATCATACTCGAATGCAGGACAAGTCCTAAATATTTGCCCCTTCCCTTGCAGTAATTTA(/G)TTTTCTGTATGGACTGTCCCTCCCCCAGAGGCTTCCCCACCCTCCATTGCCTGGCCCAGGTGAGCAGCTTGGCAGGTCTCCAAGTGGAACCCGGTCCAGAC NG 10 8 17 8 24 0 100 5 10
    250908090534_8s85eux5 CATGATTCCTTTCCTTCACAGAATACTCCTACATGAAAATGTTTTTTCTAAAACAAAACCAGCCCAAACTAGTTATCAACACAGTCATTTTAAAAAGAGTC(/A)CTCCAAAACTTTAAATACCCTTTCACATGCTTTATTTCCTATGGGAGAACTGATGAGGAAAATTATCATAAATGTTTAAACTTTTAATTATAAAATTTAAA NG 10 8 17 8 24 0 100 5 10
    250908090534_8s85eet3 TTTAAGGCATATAGAAACACAATCCTCTCATCCTTATTTCATATATTTCCATCACTGAAACAAAAATTTACCTGAACCCCAGAACCACCATCAAAATGAAG(/C)TTTCATGGAAAGGATATAGGATCTAAAAGTAATGGGGACAGGGTATGGTATGCATATTTCTATTCTTCTGTTATTGGATACAAAGCACTTTGTTTGCTAAA NG 10 8 17 8 24 0 100 5 10
    250908090534_8s85dvih TGGAATGGGTTCCCGAGGCCCTCAGCCAGTGTGCAGTCGCTCCCCACTGTCCATATCACAGGACAGAACCAGCTTTCTGGAAAAGATCAAGTGTAGCCTTA(/G)CCATGGGAGGAACAATGAGGGCTCCAAAGCCACCACCCCAAGTAAATTATTCTTGTGCAATGCAAAACAGAAAATATCATAGTAGTAAGAGGGGATCTATA NG 10 8 17 8 24 0 100 5 10